A corpus sweep under the doc/prose standards found 15 links whose #fragment
named no anchor in its target — reworded headings, one relocated contract
(tool-fs → the group README's no-timeout rule), and zh sides citing English
slugs their Chinese headings never produce. Fixed all 15 (zh sides get the
conventional explicit <a id> + English fragment), fixed the one generator-owned
instance at its source (gen-doc-graphs), and extended verify-md-links to
resolve fragments onto Markdown targets — same-file anchors included — against
heading slugs and explicit <a id>, so the class is gated instead of manually
grepped. Remaining probes (narrated history, duplication shingles, comment
transcripts, budgets) came back clean; sibling-adapter README symmetry and
implemented-note contrasts are deliberate keeps.
Move the triplet to implemented/architecture/, rewrite Proposal into a
present-tense Decision, fold Acceptance criteria and Risks into
Consequences (recording what pins the result), retitle the migration
section to what the move actually touched, and repoint the seven
inbound FIXME/README links.
Code already treats $DSH_HOME/.env as ordinary launch environment and stores managed credentials in .credentials.yaml, but public docs still described the old store, old precedence, removed literal adapter keys, and the deleted TUI. That directed users to the wrong file and overstated the supported configuration surface.
Update the existing English and Chinese owners in place, document inherited > managed > project > user credential resolution, and record the loadLayeredEnv export. Regenerate only pairing records and the source-line catalog; add no new section or site route.
The profile rework left references to the old entry modes behind. Renames
the user patch-layer API and its spec file (watchPersonalPatches ->
watchUserPatches, personal-config.spec.ts -> user-patches.spec.ts) and
retargets the prose that still named `config.yaml`, `--config`, raw-config
mode, and surface overlays: repository-plugin and mcp-memory READMEs, the
credentials-local anchor into app-boot, vendor manifest items 12-13, the
vendored include/hmr comments, and install.sh.
Restores the boot-failure guard the rework dropped with raw mode: the
built-bin case now boots `--profile web --patch <invalid>` and asserts the
settled diagnostic and exit 1, so the HMR initial-scan deadlock stays
covered; its orphaned raw fixture is renamed and the unused one deleted.
The superseded personal-config Agent Note and its superseding profile note
are now cross-linked.
Two had real security consequences:
The bootstrap rejection ran on npm dotenv's parser while process.loadEnvFile
applied the file with Node's own. Two independently maintained dialects meant
the check and the thing it guards could disagree: a name Node accepts but the
checker misses would reach process.env unchecked, and BASH_ENV there runs a
file of the project's choosing on every `bash -c` the bash tool issues. Parse
once with node:util's parseEnv — the same engine loadEnvFile uses — and assign
the entries already checked, which also drops the dotenv dependency.
llm-pi-ai still returned a literal profile.apiKey ahead of everything, and it
registers a settings namespace, so the defect removed from llm-deepseek
survived intact in its design twin. The field is gone from the profile schema,
the resolution path, and the tests.
The rest are consistency and documentation defects the review named:
- verify-config-source-ownership did not scan the Python runtime's bundled
cordis.yml, which still inlined apiKey and baseURL. Both are covered now, and
the line-anchored INLINE_DENY documents that it is a tripwire, not a parser.
- The deny list missed NODE_TLS_REJECT_UNAUTHORIZED, the askpass hooks, the
GIT_CONFIG_* redirections, and PYTHONHOME — all implied by its own stated
rule about what a variable does.
- Snapshot lookups folded case on Windows, where environment names are
case-insensitive and an exact-match Map could miss a higher-ranked layer.
- The credentials note claimed a read-time permission check was "not taken"
while this PR implemented it; the credentials-local README still described
two layers, live process.env reads, dotenv-era limitations, and a renamed
anchor; the llm-deepseek README still advertised the removed literal apiKey;
and web.ts and base.cordis.yml kept personal-overlay wording.
- The ownership note's literal-apiKey claim now names its scope: the
web-search providers keep a literal field but register no settings
namespace, so nothing can shadow a stored credential through them.
$DSH_HOME/.env carried two incompatible jobs. As credentials-local's writable
secret store it could not be hoisted into process.env — hoisting makes every
stored key read as a read-only launch override and blocks rotation from the
TUI and the web page. But its name and dotenv format promise an environment
file, so a DEEPSEEK_BASE_URL sitting beside a working DEEPSEEK_API_KEY in the
same file was silently ignored: only the credential provider read the
document, and it addresses credential references alone.
Split the two jobs into two files.
.credentials.yaml is the provider-managed store: a strict YAML mapping of
CredentialRef to non-empty string, no version field, no wrapper level. Because
it holds credentials and nothing else, a non-mapping root, a non-identifier
key, a non-string value, an empty string, a duplicate key, and malformed YAML
are all rejections rather than skipped entries — loud at boot and at a write,
warn-and-keep-last-good on a live reload. The dotenv physical-line editor
gives way to a patch of the parsed document, so comments and untouched entries
keep their formatting and any string value round-trips, multi-line included.
Writer lock, read-modify-write, atomic 0600 write under a 0700 directory,
watcher, self-write suppression, and quiescent disposal are unchanged.
$DSH_HOME/.env becomes the user's ordinary environment layer. app-boot's new
loadLayeredEnv loads the invoking directory's .env then the Harness home's,
giving user < project < inherited; the home resolves from the inherited
environment first, so a project .env cannot redirect it.
Credential precedence is unchanged: the live environment still wins read-only
over the file, and shadowed writes still reject. Whether a provider-managed
store should instead win over the environment is a separate decision.
No migration: a key already in $DSH_HOME/.env keeps resolving through the new
environment layer, as a read-only env source that shadows the stored one.
The `readDenyPaths` policy field shipped in the previous commit broke Linux
confinement outright. bwrap has to create the `/dev/null` bind's mount point
inside a tree its own profile has already made read-only, so it refused the
entire confinement whenever the parent directory was absent — every host that
has not stored a credential yet, including a fresh install:
bwrap: Can't mkdir parents for /home/runner/.dsh/.env: Read-only file system
which the executor correctly classifies as SANDBOX_UNAVAILABLE, so every
confined bash call failed closed. Landlock cannot subtract from its own `/`
read grant, so it reported `partial` enforcement on every confined call for a
file it never hid, with no way to switch the denial off (schemastery fills an
omitted array with `[]`, so empty and omitted were indistinguishable).
A protection that breaks confinement where it works and misreports it where it
does not is worse than a documented absence. Revert the field, both expressible
backends, the enforcement downgrade, and the policy default; state the residue
plainly in the credentials-local READMEs — file mode stops other OS users, not
the model — and keep the OS-keychain provider recorded as the real answer.
The narrower discipline stands: no surface hoists the credential document into
`process.env`, and the model is never handed a resolved path to it.
Both provider READMEs state what actually holds: credentials-local now
documents the physical-line editor, the read-modify-write under the
writer lock, and a Security boundary section saying plainly that the file
mode stops other OS users and not the model. sandbox-policy documents
readDenyPaths and its per-backend enforcement. The llm READMEs carry the
registration handle, pi-ai's credential-miss semantics, and DeepSeek's
same-generation snapshot; app-boot and the CLI README stop describing
$DSH_HOME/.env as an environment layer.
A new Agent Note records the round (and the prior seam note cross-links
it); the sandbox and core catalog pages gain readDenyPaths and
AdapterRegistrationHandle with their manifest entries. The headless
missing-credential snapshot re-records for the reworded guidance, pi-ai
gains the Loader-composition guard its twin already had, and the
deliberate provider symmetry is marked for the clone detector.
New credentials data-structure page (type-equiv manifested), group README,
rewritten llm-deepseek/llm-pi-ai READMEs (dynamic configuration, dict
profiles, credential chain), capability-seams/service-role registration,
Agent Note (bilingual), demo compositions mounting settings-local +
credentials-local with no inline key plumbing, installSettingsSection
consumer helper on the settings seam (deduplicating both adapters' wiring),
jscpd symmetry markers for the provider twins, runtime-closure additions for
python/sdk-runtime, and doc-budget ceilings AGENTS.md 1750→1755 /
packages/README.md 850→865 for the structural one-line group rows.
