feat: Code Mode — the registry's mode config, the SDK codegen, and the run_code bridge

The dsh-tools half of the Code Mode RFC (its fourth, final change): the
registry gains its first config — mode: native | code | both — and OWNS how
its tools reach the model. 'code' contributes exactly one wire tool,
run_code, plus a lazy tools:sdk prompt section declaring every other tool
as a generated TypeScript API (jsonSchemaToTs: total over the defineTool
subset, unknown degradation, lexicographic byte-identical rendering);
'both' ships both representations; 'native' is byte-for-byte the old
behavior. Non-native modes fail every assembly loudly without a
typescript-language ctx.codeRuntime.

run_code's dispatch bridge: JSON-normalizes each binding argument before
dispatch (what dispatches is what the tool/code-dispatch event logs — the
append can never fail on payload shape; BigInt/circulars reject that one
call), serializes all program tool calls through a per-run queue (even
Promise.all — no concurrency-safety metadata yet), routes every sub-call
through tools/pre-execute → tools/post-execute (a deny rejects the
program-side promise), drops sub-call additionalContext (no safe outlet
mid-run; pinned), owns a run-scoped abort that follows the outer signal in
and fires on settlement (in-flight sub-dispatch aborted, queued abandoned,
queue drained before returning), and converts a failed run into
CodeRunFailedError → a structured isError carrying kind + captured logs.
tool/code-dispatch joins SessionEventMap by declaration merging (log-only;
deriveMessages ignores it).

The composed surface: the tools config forwards through agent-core and
both app packages; examples/code-agent + demo:code run the worker runtime
under mode code (keyless boot smoke + a with-key e2e proving the collapsed
[run_code] header, the dispatch events, and the file the program wrote);
two new snapshot scenarios (code-mode-turn, both-mode-turn) record the SDK
section, collapsed header, dispatch events, and result card — each its own
header-pinning class (the harness gains per-scenario config overlays and
per-class pins). Catalogs, graphs, cookbook, hooks-bridge notes, and the
RFC (moved to implemented/, restructured to decision-era headings) updated
in the same change.

docs/cordis-catalog/events.md

@@ -307,7 +307,7 @@ A tool was registered or unregistered (the available tool set changed).
 'tools/change'(): void
 ```
 
-Source: [`packages/core/tools/src/index.ts:97`](../../packages/core/tools/src/index.ts)
+Source: [`packages/core/tools/src/index.ts:111`](../../packages/core/tools/src/index.ts)
 
 ### `tools/post-execute` — waterfall
 
@@ -319,7 +319,7 @@ Waterfall AFTER a tool runs — where hook plugins inspect the result and accept
 
 Types: [ToolExecution](../core-data-structures/tools.md) · [ToolExecutionResult](../core-data-structures/tools.md)
 
-Source: [`packages/core/tools/src/index.ts:92`](../../packages/core/tools/src/index.ts)
+Source: [`packages/core/tools/src/index.ts:106`](../../packages/core/tools/src/index.ts)
 
 ### `tools/pre-execute` — waterfall
 
@@ -331,7 +331,7 @@ Waterfall BEFORE a tool runs — the gate where sandbox, permission, and hook pl
 
 Types: [ToolExecution](../core-data-structures/tools.md)
 
-Source: [`packages/core/tools/src/index.ts:76`](../../packages/core/tools/src/index.ts)
+Source: [`packages/core/tools/src/index.ts:90`](../../packages/core/tools/src/index.ts)
 
 ## Inherited events (cordis core + loader/hmr/timer)
 

docs/cordis-catalog/services.md

@@ -213,7 +213,7 @@ Source: [`packages/core/system-prompt/src/index.ts:291`](../../packages/core/sys
 
 ## `ctx.tools` — `ToolRegistry`
 
-Tool registry (`ctx.tools`): tool plugins register definitions; the agent loop executes calls through the `tools/pre-execute` → dispatch → `tools/post-execute` pipeline. The registry contributes its schemas into the system-prompt assembly.
+Tool registry (`ctx.tools`): tool plugins register definitions; the agent loop executes calls through the `tools/pre-execute` → dispatch → `tools/post-execute` pipeline. The registry contributes its schemas into the system-prompt assembly — WHICH schemas is governed by its `mode` config (see Config.mode); under a non-native mode it also registers the `run_code` tool and the `tools:sdk` prompt section itself.
 
 ```ts cordis-catalog
 register(definition: ToolDefinition): () => void
@@ -224,7 +224,7 @@ async execute(exec: ToolExecution): Promise<ToolExecutionResult>
 
 Types: [ToolDefinition](../core-data-structures/tools.md) · [ToolExecution](../core-data-structures/tools.md) · [ToolExecutionResult](../core-data-structures/tools.md)
 
-Source: [`packages/core/tools/src/index.ts:278`](../../packages/core/tools/src/index.ts)
+Source: [`packages/core/tools/src/index.ts:316`](../../packages/core/tools/src/index.ts)
 
 ## `ctx.web` — `WebService`