feat: Code Mode — the registry's mode config, the SDK codegen, and the run_code bridge

The dsh-tools half of the Code Mode RFC (its fourth, final change): the
registry gains its first config — mode: native | code | both — and OWNS how
its tools reach the model. 'code' contributes exactly one wire tool,
run_code, plus a lazy tools:sdk prompt section declaring every other tool
as a generated TypeScript API (jsonSchemaToTs: total over the defineTool
subset, unknown degradation, lexicographic byte-identical rendering);
'both' ships both representations; 'native' is byte-for-byte the old
behavior. Non-native modes fail every assembly loudly without a
typescript-language ctx.codeRuntime.

run_code's dispatch bridge: JSON-normalizes each binding argument before
dispatch (what dispatches is what the tool/code-dispatch event logs — the
append can never fail on payload shape; BigInt/circulars reject that one
call), serializes all program tool calls through a per-run queue (even
Promise.all — no concurrency-safety metadata yet), routes every sub-call
through tools/pre-execute → tools/post-execute (a deny rejects the
program-side promise), drops sub-call additionalContext (no safe outlet
mid-run; pinned), owns a run-scoped abort that follows the outer signal in
and fires on settlement (in-flight sub-dispatch aborted, queued abandoned,
queue drained before returning), and converts a failed run into
CodeRunFailedError → a structured isError carrying kind + captured logs.
tool/code-dispatch joins SessionEventMap by declaration merging (log-only;
deriveMessages ignores it).

The composed surface: the tools config forwards through agent-core and
both app packages; examples/code-agent + demo:code run the worker runtime
under mode code (keyless boot smoke + a with-key e2e proving the collapsed
[run_code] header, the dispatch events, and the file the program wrote);
two new snapshot scenarios (code-mode-turn, both-mode-turn) record the SDK
section, collapsed header, dispatch events, and result card — each its own
header-pinning class (the harness gains per-scenario config overlays and
per-class pins). Catalogs, graphs, cookbook, hooks-bridge notes, and the
RFC (moved to implemented/, restructured to decision-era headings) updated
in the same change.

docs/capability-seams.md

@@ -102,6 +102,7 @@ flowchart LR
   svc_bash --> pkg_hooks_claude
   svc_bash --> pkg_hooks_codex
   svc_bash --> pkg_tool_bash
+  svc_codeRuntime --> pkg_tools
   svc_compact --> pkg_compact_basic
   svc_fs --> pkg_tool_fs
   svc_llm --> pkg_agent_loop
@@ -139,7 +140,7 @@ flowchart LR
 | `ctx.agents` | `core` | [`agent`](../packages/core/agent) | - | [`agent-loop`](../packages/core/agent-loop), [`acp`](../packages/ui/acp), [`subagent-inprocess`](../packages/subagent/subagent-inprocess), [`stdio-agent`](../packages/ui/stdio-agent), [`invariants`](../packages/support/invariants) | - | Owns live Agent handles and the create/resume factory seam. |
 | `ctx.agentLoop` | `bundle` | [`agent-loop`](../packages/core/agent-loop) | - | [`agent-core`](../packages/core/agent-core) | - | The one concrete loop plugin; extension packages depend on dsh-agent events and services, not on this package. |
 | `ctx.bash` | `seam` | [`bash`](../packages/bash/bash) | [`bash-local`](../packages/bash/bash-local) | [`tool-bash`](../packages/bash/tool-bash), [`hooks-claude`](../packages/hooks/hooks-claude), [`hooks-codex`](../packages/hooks/hooks-codex) | - | The model-facing bash tools and hook bridges consume this seam; sandboxed or remote executors can replace bash-local. |
-| `ctx.codeRuntime` | `seam` | [`code-runtime`](../packages/code-runtime/code-runtime) | [`code-runtime-worker`](../packages/code-runtime/code-runtime-worker) | - | - | Runs one model-written program against host-provided async bindings; backends differ by substrate and language (the Code Mode RFC specifies the worker-thread backend and the tool-registry consumer). |
+| `ctx.codeRuntime` | `seam` | [`code-runtime`](../packages/code-runtime/code-runtime) | [`code-runtime-worker`](../packages/code-runtime/code-runtime-worker) | [`tools`](../packages/core/tools) | - | Runs one model-written program against host-provided async bindings; backends differ by substrate and language (the tool registry consumes it for Code Mode). |
 | `ctx.fs` | `seam` | [`fs`](../packages/fs/fs) | [`fs-local`](../packages/fs/fs-local) | [`tool-fs`](../packages/fs/tool-fs) | [`fs-policy`](../packages/fs/fs-policy) | tool-fs executes read/write/edit through ctx.fs; fs-policy contributes observed-state checks through the fs/* event gate. |
 | `ctx.compact` | `seam` | [`compact`](../packages/compact/compact) | [`compact-basic`](../packages/compact/compact-basic) | [`compact-basic`](../packages/compact/compact-basic) | - | The basic backend currently consumes the pre-step event directly; a model-facing compact tool remains deferred. |
 | `ctx.subagents` | `seam` | [`subagent`](../packages/subagent/subagent) | [`subagent-spawn`](../packages/subagent/subagent-spawn), [`subagent-fork`](../packages/subagent/subagent-fork), [`subagent-acp`](../packages/subagent/subagent-acp), [`subagent-mock`](../packages/support/subagent-mock) | [`tool-subagent`](../packages/subagent/tool-subagent) | - | Providers implement transports; tool-subagent exposes one configured provider as a model-facing tool name. |